******************************************************************************** conan install hdf5/1.10.7@#99904d833300f80e47ecab3214b6697d --build=hdf5 -pr /home/conan/w/prod/BuildSingleReference/26253/fa24e1e0-ee41-481d-b8ce-f86e7a8d5266/profile_linux_5_libstdcpp_gcc_debug_64.hdf5-shared-False.txt ******************************************************************************** Auto detecting your dev setup to initialize the default profile (/home/conan/w/prod/BuildSingleReference/.conan/profiles/default) CC and CXX: /usr/bin/gcc, /usr/bin/g++ Found gcc 5.4 gcc>=5, using the major as version ************************* WARNING: GCC OLD ABI COMPATIBILITY *********************** Conan detected a GCC version > 5 but has adjusted the 'compiler.libcxx' setting to 'libstdc++' for backwards compatibility. Your compiler is likely using the new CXX11 ABI by default (libstdc++11). If you want Conan to use the new ABI for the default profile, run: $ conan profile update settings.compiler.libcxx=libstdc++11 default Or edit '/home/conan/w/prod/BuildSingleReference/.conan/profiles/default' and set compiler.libcxx=libstdc++11 ************************************************************************************ Default settings os=Linux os_build=Linux arch=x86_64 arch_build=x86_64 compiler=gcc compiler.version=5 compiler.libcxx=libstdc++ build_type=Release *** You can change them in /home/conan/w/prod/BuildSingleReference/.conan/profiles/default *** *** Or override with -s compiler='other' -s ...s*** Configuration: [settings] arch=x86_64 build_type=Debug compiler=gcc compiler.libcxx=libstdc++ compiler.version=5 os=Linux [options] hdf5:shared=False [build_requires] [env] zlib/1.2.12: Not found in local cache, looking in remotes... zlib/1.2.12: Trying with 'conan-center'... Downloading conanmanifest.txt Downloading conanfile.py Downloading conan_export.tgz zlib/1.2.12: Downloaded recipe revision 82202701ea360c0863f1db5008067122 hdf5/1.10.7: Forced build from source Installing package: hdf5/1.10.7 Requirements hdf5/1.10.7 from local cache - Cache zlib/1.2.12 from 'conan-center' - Downloaded Packages hdf5/1.10.7:c61a75fde112e2b494526fc1475faa92eec825fa - Build zlib/1.2.12:b1b85bfdc2206d81b3ed6a49e78498182bb98ef3 - Download Installing (downloading, building) binaries... zlib/1.2.12: Retrieving package b1b85bfdc2206d81b3ed6a49e78498182bb98ef3 from remote 'conan-center' Downloading conanmanifest.txt Downloading conaninfo.txt Downloading conan_package.tgz zlib/1.2.12: Package installed b1b85bfdc2206d81b3ed6a49e78498182bb98ef3 zlib/1.2.12: Downloaded package revision fe3d1022e1a6d26e3cea798390bb67d3 [HOOK - conan-center.py] pre_source(): [IMMUTABLE SOURCES (KB-H010)] OK hdf5/1.10.7: Configuring sources in /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.10.7/_/_/source [HOOK - conan-center.py] post_source(): [LIBCXX MANAGEMENT (KB-H011)] OK [HOOK - conan-center.py] post_source(): [CPPSTD MANAGEMENT (KB-H022)] OK [HOOK - conan-center.py] post_source(): [SHORT_PATHS USAGE (KB-H066)] OK hdf5/1.10.7: Copying sources to build folder hdf5/1.10.7: Building your package in /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.10.7/_/_/build/c61a75fde112e2b494526fc1475faa92eec825fa hdf5/1.10.7: Generator cmake created conanbuildinfo.cmake hdf5/1.10.7: Aggregating env generators [HOOK - conan-center.py] pre_build(): [FPIC MANAGEMENT (KB-H007)] OK. 'fPIC' option found and apparently well managed [HOOK - conan-center.py] pre_build(): [FPIC MANAGEMENT (KB-H007)] OK hdf5/1.10.7: Calling build() patches/fix-missing-function-prototypes-1.10.5+.patch: source file is different - b'src/H5Odeprec.c' hdf5/1.10.7: WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: file 1/2: b'src/H5Fsuper.c' WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: hunk no.1 doesn't match source file at line 57 WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: expected: b'' WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: actual : b'herr_t H5O__fsinfo_set_version(H5F_t *f, H5O_fsinfo_t *fsinfo);' WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: already patched b'src/H5Fsuper.c' WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: file 2/2: b'src/H5Odeprec.c' WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: hunk no.1 doesn't match source file at line 54 WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: expected: b'/********************/' WARN: patches/fix-missing-function-prototypes-1.10.5+.patch: actual : b'' hdf5/1.10.7: ERROR: Package 'c61a75fde112e2b494526fc1475faa92eec825fa' build failed hdf5/1.10.7: WARN: Build folder /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.10.7/_/_/build/c61a75fde112e2b494526fc1475faa92eec825fa ERROR: hdf5/1.10.7: Error in build() method, line 104 self._patch_sources() while calling '_patch_sources', line 110 tools.patch(**patch) ConanException: Failed to apply patch: patches/fix-missing-function-prototypes-1.10.5+.patch