******************************************************************************** conan install hdf5/1.12.2@#44c35f7428d91fc9513d8810216be9c1 --build=hdf5 -pr /home/conan/w/prod/BuildSingleReference/148783/99427bf3-2854-47dc-ab12-bda66163ffe6/profile_linux_8_libstdcpp11_gcc_debug_64.hdf5-shared-False.txt -c tools.system.package_manager:mode=install -c tools.system.package_manager:sudo=True ******************************************************************************** Auto detecting your dev setup to initialize the default profile (/home/conan/w/prod/BuildSingleReference/.conan/profiles/default) CC and CXX: /usr/bin/gcc, /usr/bin/g++ Found gcc 8 gcc>=5, using the major as version ************************* WARNING: GCC OLD ABI COMPATIBILITY *********************** Conan detected a GCC version > 5 but has adjusted the 'compiler.libcxx' setting to 'libstdc++' for backwards compatibility. Your compiler is likely using the new CXX11 ABI by default (libstdc++11). If you want Conan to use the new ABI for the default profile, run: $ conan profile update settings.compiler.libcxx=libstdc++11 default Or edit '/home/conan/w/prod/BuildSingleReference/.conan/profiles/default' and set compiler.libcxx=libstdc++11 ************************************************************************************ Default settings os=Linux os_build=Linux arch=x86_64 arch_build=x86_64 compiler=gcc compiler.version=8 compiler.libcxx=libstdc++ build_type=Release *** You can change them in /home/conan/w/prod/BuildSingleReference/.conan/profiles/default *** *** Or override with -s compiler='other' -s ...s*** Configuration: [settings] arch=x86_64 build_type=Debug compiler=gcc compiler.libcxx=libstdc++11 compiler.version=8 os=Linux [options] hdf5:shared=False [build_requires] [env] [conf] tools.system.package_manager:mode=install tools.system.package_manager:sudo=True zlib/1.2.13: Not found in local cache, looking in remotes... zlib/1.2.13: Trying with 'conan-center'... Downloading conanmanifest.txt Downloading conanfile.py Downloading conan_export.tgz zlib/1.2.13: Downloaded recipe revision 13c96f538b52e1600c40b88994de240f hdf5/1.12.2: Forced build from source Installing package: hdf5/1.12.2 Requirements hdf5/1.12.2 from local cache - Cache zlib/1.2.13 from 'conan-center' - Downloaded Packages hdf5/1.12.2:3e2fd036dff6573ba4fc2820c41fa61dc7e052a6 - Build zlib/1.2.13:761432f3453a17c960259b5b2605153e3bcffd7d - Download Installing (downloading, building) binaries... zlib/1.2.13: Retrieving package 761432f3453a17c960259b5b2605153e3bcffd7d from remote 'conan-center' Downloading conanmanifest.txt Downloading conaninfo.txt Downloading conan_package.tgz zlib/1.2.13: Package installed 761432f3453a17c960259b5b2605153e3bcffd7d zlib/1.2.13: Downloaded package revision 46ff29dbfae8487b4ab2dcd42b16bf4e [HOOK - conan-center.py] pre_source(): [IMMUTABLE SOURCES (KB-H010)] OK hdf5/1.12.2: Configuring sources in /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/source/src hdf5/1.12.2: [HOOK - conan-center.py] post_source(): [LIBCXX MANAGEMENT (KB-H011)] OK [HOOK - conan-center.py] post_source(): [CPPSTD MANAGEMENT (KB-H022)] OK [HOOK - conan-center.py] post_source(): [SHORT_PATHS USAGE (KB-H066)] OK hdf5/1.12.2: Copying sources to build folder hdf5/1.12.2: Building your package in /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6 hdf5/1.12.2: Generator txt created conanbuildinfo.txt hdf5/1.12.2: Calling generate() hdf5/1.12.2: Preset 'debug' added to CMakePresets.json. Invoke it manually using 'cmake --preset debug' hdf5/1.12.2: If your CMake version is not compatible with CMakePresets (<3.19) call cmake like: 'cmake -G "Unix Makefiles" -DCMAKE_TOOLCHAIN_FILE=/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/generators/conan_toolchain.cmake -DCMAKE_POLICY_DEFAULT_CMP0077=NEW -DCMAKE_POLICY_DEFAULT_CMP0091=NEW -DCMAKE_BUILD_TYPE=Debug' hdf5/1.12.2: Aggregating env generators [HOOK - conan-center.py] pre_build(): [FPIC MANAGEMENT (KB-H007)] OK. 'fPIC' option found and apparently well managed [HOOK - conan-center.py] pre_build(): [FPIC MANAGEMENT (KB-H007)] OK hdf5/1.12.2: Calling build() hdf5/1.12.2: Apply patch (conan): Fixup target_link_libraries() targets for szip and zlib hdf5/1.12.2: CMake command: cmake -G "Unix Makefiles" -DCMAKE_TOOLCHAIN_FILE="/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/generators/conan_toolchain.cmake" -DCMAKE_INSTALL_PREFIX="/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/package/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6" -DCMAKE_POLICY_DEFAULT_CMP0077="NEW" -DCMAKE_POLICY_DEFAULT_CMP0091="NEW" -DCMAKE_BUILD_TYPE="Debug" "/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/src" ----Running------ > cmake -G "Unix Makefiles" -DCMAKE_TOOLCHAIN_FILE="/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/generators/conan_toolchain.cmake" -DCMAKE_INSTALL_PREFIX="/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/package/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6" -DCMAKE_POLICY_DEFAULT_CMP0077="NEW" -DCMAKE_POLICY_DEFAULT_CMP0091="NEW" -DCMAKE_BUILD_TYPE="Debug" "/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/src" ----------------- -- Using Conan toolchain: /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/generators/conan_toolchain.cmake -- Conan toolchain: Setting CMAKE_POSITION_INDEPENDENT_CODE=ON (options.fPIC) -- Conan toolchain: Setting BUILD_SHARED_LIBS = OFF -- The C compiler identification is GNU 8.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Looking for include file sys/file.h -- Looking for include file sys/file.h - found -- Looking for include files sys/file.h, sys/ioctl.h -- Looking for include files sys/file.h, sys/ioctl.h - found -- Looking for 3 include files sys/file.h, ..., sys/resource.h -- Looking for 3 include files sys/file.h, ..., sys/resource.h - found -- Looking for 4 include files sys/file.h, ..., sys/socket.h -- Looking for 4 include files sys/file.h, ..., sys/socket.h - found -- Looking for 5 include files sys/file.h, ..., sys/stat.h -- Looking for 5 include files sys/file.h, ..., sys/stat.h - found -- Looking for 6 include files sys/file.h, ..., sys/time.h -- Looking for 6 include files sys/file.h, ..., sys/time.h - found -- Looking for 7 include files sys/file.h, ..., sys/types.h -- Looking for 7 include files sys/file.h, ..., sys/types.h - found -- Looking for 8 include files sys/file.h, ..., features.h -- Looking for 8 include files sys/file.h, ..., features.h - found -- Looking for 9 include files sys/file.h, ..., dirent.h -- Looking for 9 include files sys/file.h, ..., dirent.h - found -- Looking for 10 include files sys/file.h, ..., setjmp.h -- Looking for 10 include files sys/file.h, ..., setjmp.h - found -- Looking for 11 include files sys/file.h, ..., stddef.h -- Looking for 11 include files sys/file.h, ..., stddef.h - found -- Looking for 12 include files sys/file.h, ..., stdint.h -- Looking for 12 include files sys/file.h, ..., stdint.h - found -- Looking for 13 include files sys/file.h, ..., unistd.h -- Looking for 13 include files sys/file.h, ..., unistd.h - found -- Looking for 14 include files sys/file.h, ..., pwd.h -- Looking for 14 include files sys/file.h, ..., pwd.h - found -- Looking for 15 include files sys/file.h, ..., io.h -- Looking for 15 include files sys/file.h, ..., io.h - not found -- Looking for 15 include files sys/file.h, ..., winsock2.h -- Looking for 15 include files sys/file.h, ..., winsock2.h - not found -- Looking for 15 include files sys/file.h, ..., globus/common.h -- Looking for 15 include files sys/file.h, ..., globus/common.h - not found -- Looking for 15 include files sys/file.h, ..., pdb.h -- Looking for 15 include files sys/file.h, ..., pdb.h - not found -- Looking for 15 include files sys/file.h, ..., pthread.h -- Looking for 15 include files sys/file.h, ..., pthread.h - found -- Looking for 16 include files sys/file.h, ..., srbclient.h -- Looking for 16 include files sys/file.h, ..., srbclient.h - not found -- Looking for 16 include files sys/file.h, ..., string.h -- Looking for 16 include files sys/file.h, ..., string.h - found -- Looking for 17 include files sys/file.h, ..., strings.h -- Looking for 17 include files sys/file.h, ..., strings.h - found -- Looking for 18 include files sys/file.h, ..., stdlib.h -- Looking for 18 include files sys/file.h, ..., stdlib.h - found -- Looking for 19 include files sys/file.h, ..., memory.h -- Looking for 19 include files sys/file.h, ..., memory.h - found -- Looking for 20 include files sys/file.h, ..., dlfcn.h -- Looking for 20 include files sys/file.h, ..., dlfcn.h - found -- Looking for 21 include files sys/file.h, ..., inttypes.h -- Looking for 21 include files sys/file.h, ..., inttypes.h - found -- Looking for 22 include files sys/file.h, ..., netinet/in.h -- Looking for 22 include files sys/file.h, ..., netinet/in.h - found -- Looking for 23 include files sys/file.h, ..., netdb.h -- Looking for 23 include files sys/file.h, ..., netdb.h - found -- Looking for 24 include files sys/file.h, ..., arpa/inet.h -- Looking for 24 include files sys/file.h, ..., arpa/inet.h - found -- Looking for 25 include files sys/file.h, ..., stdbool.h -- Looking for 25 include files sys/file.h, ..., stdbool.h - found -- Looking for include file quadmath.h -- Looking for include file quadmath.h - found -- Looking for ceil in m; -- Looking for ceil in m; - found -- Looking for dlopen in dl;m -- Looking for dlopen in dl;m - found -- Looking for WSAStartup in ws2_32;m;dl -- Looking for WSAStartup in ws2_32;m;dl - not found -- Looking for gethostbyname in wsock32;m;dl -- Looking for gethostbyname in wsock32;m;dl - not found -- Looking for gethostname in ucb;m;dl -- Looking for gethostname in ucb;m;dl - not found -- Looking for lseek64 -- Looking for lseek64 - found -- Looking for fseeko -- Looking for fseeko - found -- Performing Test HAVE_STAT64_STRUCT -- Performing Test HAVE_STAT64_STRUCT - Success -- Looking for stat64 -- Looking for stat64 - found -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of unsigned -- Check size of unsigned - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of __int64 -- Check size of __int64 - failed -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of long double -- Check size of long double - done -- Check size of int8_t -- Check size of int8_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of int_least8_t -- Check size of int_least8_t - done -- Check size of uint_least8_t -- Check size of uint_least8_t - done -- Check size of int_fast8_t -- Check size of int_fast8_t - done -- Check size of uint_fast8_t -- Check size of uint_fast8_t - done -- Check size of int16_t -- Check size of int16_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Check size of int_least16_t -- Check size of int_least16_t - done -- Check size of uint_least16_t -- Check size of uint_least16_t - done -- Check size of int_fast16_t -- Check size of int_fast16_t - done -- Check size of uint_fast16_t -- Check size of uint_fast16_t - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of int_least32_t -- Check size of int_least32_t - done -- Check size of uint_least32_t -- Check size of uint_least32_t - done -- Check size of int_fast32_t -- Check size of int_fast32_t - done -- Check size of uint_fast32_t -- Check size of uint_fast32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of int_least64_t -- Check size of int_least64_t - done -- Check size of uint_least64_t -- Check size of uint_least64_t - done -- Check size of int_fast64_t -- Check size of int_fast64_t - done -- Check size of uint_fast64_t -- Check size of uint_fast64_t - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - done -- Check size of ptrdiff_t -- Check size of ptrdiff_t - done -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - done -- Check size of time_t -- Check size of time_t - done -- Check size of _Bool -- Check size of _Bool - done -- Looking for CLOCK_MONOTONIC -- Looking for CLOCK_MONOTONIC - not found -- Performing Test H5_HAVE_TM_GMTOFF -- Performing Test H5_HAVE_TM_GMTOFF - Success -- Performing Test H5_HAVE___TM_GMTOFF -- Performing Test H5_HAVE___TM_GMTOFF - Failed -- Performing Test H5_TIME_WITH_SYS_TIME -- Performing Test H5_TIME_WITH_SYS_TIME - Success -- Performing Test H5_HAVE_STRUCT_TIMEZONE -- Performing Test H5_HAVE_STRUCT_TIMEZONE - Failed -- Looking for gettimeofday -- Looking for gettimeofday - found -- Performing Test H5_HAVE_STAT_ST_BLOCKS -- Performing Test H5_HAVE_STAT_ST_BLOCKS - Success -- Looking for ioctl -- Looking for ioctl - found -- Performing Test H5_HAVE_STRUCT_VIDEOCONFIG -- Performing Test H5_HAVE_STRUCT_VIDEOCONFIG - Failed -- Performing Test H5_HAVE_STRUCT_TEXT_INFO -- Performing Test H5_HAVE_STRUCT_TEXT_INFO - Failed -- Looking for _getvideoconfig -- Looking for _getvideoconfig - not found -- Looking for gettextinfo -- Looking for gettextinfo - not found -- Looking for _scrsize -- Looking for _scrsize - not found -- Looking for GetConsoleScreenBufferInfo -- Looking for GetConsoleScreenBufferInfo - not found -- Looking for TIOCGWINSZ -- Looking for TIOCGWINSZ - found -- Looking for TIOCGETD -- Looking for TIOCGETD - found -- Looking for getpwuid -- Looking for getpwuid - found -- Looking for alarm -- Looking for alarm - found -- Looking for fcntl -- Looking for fcntl - found -- Looking for flock -- Looking for flock - found -- Looking for fork -- Looking for fork - found -- Looking for frexpf -- Looking for frexpf - found -- Looking for frexpl -- Looking for frexpl - found -- Looking for gethostname -- Looking for gethostname - found -- Looking for getrusage -- Looking for getrusage - found -- Looking for llround -- Looking for llround - not found -- Looking for llroundf -- Looking for llroundf - not found -- Looking for lround -- Looking for lround - not found -- Looking for lroundf -- Looking for lroundf - not found -- Looking for lstat -- Looking for lstat - found -- Looking for pread -- Looking for pread - found -- Looking for pwrite -- Looking for pwrite - found -- Looking for rand_r -- Looking for rand_r - found -- Looking for random -- Looking for random - found -- Looking for round -- Looking for round - not found -- Looking for roundf -- Looking for roundf - not found -- Looking for setsysinfo -- Looking for setsysinfo - not found -- Looking for signal -- Looking for signal - found -- Looking for longjmp -- Looking for longjmp - found -- Looking for setjmp -- Looking for setjmp - found -- Looking for siglongjmp -- Looking for siglongjmp - found -- Looking for sigsetjmp -- Looking for sigsetjmp - not found -- Looking for sigprocmask -- Looking for sigprocmask - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for srandom -- Looking for srandom - found -- Looking for strdup -- Looking for strdup - found -- Looking for strtoll -- Looking for strtoll - found -- Looking for strtoull -- Looking for strtoull - found -- Looking for symlink -- Looking for symlink - found -- Looking for system -- Looking for system - found -- Looking for tmpfile -- Looking for tmpfile - found -- Looking for asprintf -- Looking for asprintf - found -- Looking for vasprintf -- Looking for vasprintf - found -- Looking for waitpid -- Looking for waitpid - found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Looking for sigsetjmp -- Looking for sigsetjmp - found -- Looking for difftime -- Looking for difftime - found -- Looking for clock_gettime -- Looking for clock_gettime - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for clock_gettime in posix4 -- Looking for clock_gettime in posix4 - not found -- Check size of __float128 -- Check size of __float128 - done -- Check size of _Quad -- Check size of _Quad - failed -- Testing maximum decimal precision for C - 21;33 -- maximum decimal precision for C var - 33 -- Found Perl: /usr/bin/perl (found version "5.26.1") -- ....All Warnings are enabled -- Conan: Target declared 'ZLIB::ZLIB' -- The CXX compiler identification is GNU 8.4.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - failed -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ - broken -- Configuring incomplete, errors occurred! See also "/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug/CMakeFiles/CMakeOutput.log". See also "/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug/CMakeFiles/CMakeError.log". hdf5/1.12.2: CMake Error at /usr/share/cmake-3.18/Modules/CMakeTestCXXCompiler.cmake:59 (message): The C++ compiler "/usr/bin/g++" is not able to compile a simple test program. It fails with the following output: Change Dir: /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/make cmTC_f494a/fast && /usr/bin/make -f CMakeFiles/cmTC_f494a.dir/build.make CMakeFiles/cmTC_f494a.dir/build make[1]: Entering directory '/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_f494a.dir/testCXXCompiler.cxx.o /usr/bin/g++ -stdlib=libstdc++ -fPIE -o CMakeFiles/cmTC_f494a.dir/testCXXCompiler.cxx.o -c /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug/CMakeFiles/CMakeTmp/testCXXCompiler.cxx g++: error: unrecognized command line option ‘-stdlib=libstdc++’; did you mean ‘-static-libstdc++’? CMakeFiles/cmTC_f494a.dir/build.make:84: recipe for target 'CMakeFiles/cmTC_f494a.dir/testCXXCompiler.cxx.o' failed make[1]: *** [CMakeFiles/cmTC_f494a.dir/testCXXCompiler.cxx.o] Error 1 make[1]: Leaving directory '/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug/CMakeFiles/CMakeTmp' Makefile:140: recipe for target 'cmTC_f494a/fast' failed make: *** [cmTC_f494a/fast] Error 2 CMake will not be able to correctly generate this project. Call Stack (most recent call first): config/cmake/HDFCXXCompilerFlags.cmake:12 (ENABLE_LANGUAGE) CMakeLists.txt:1122 (include) hdf5/1.12.2: WARN: Using the new toolchains and generators without specifying a build profile (e.g: -pr:b=default) is discouraged and might cause failures and unexpected behavior hdf5/1.12.2: WARN: Using the new toolchains and generators without specifying a build profile (e.g: -pr:b=default) is discouraged and might cause failures and unexpected behavior hdf5/1.12.2: ERROR: Package '3e2fd036dff6573ba4fc2820c41fa61dc7e052a6' build failed hdf5/1.12.2: WARN: Build folder /home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/Debug ERROR: hdf5/1.12.2: Error in build() method, line 183 cmake.configure() ConanException: Error 1 while executing cmake -G "Unix Makefiles" -DCMAKE_TOOLCHAIN_FILE="/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/build/generators/conan_toolchain.cmake" -DCMAKE_INSTALL_PREFIX="/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/package/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6" -DCMAKE_POLICY_DEFAULT_CMP0077="NEW" -DCMAKE_POLICY_DEFAULT_CMP0091="NEW" -DCMAKE_BUILD_TYPE="Debug" "/home/conan/w/prod/BuildSingleReference/.conan/data/hdf5/1.12.2/_/_/build/3e2fd036dff6573ba4fc2820c41fa61dc7e052a6/src"