******************************************************************************** conan install hdf5/1.12.0@#e040cd86e05170492afabe75ced5a41d --build=hdf5 -pr /home/conan/w/BuildSingleReference/90195/4abb2d0f-e3ed-4e69-82b3-49e11177f086/profile_linux_5_libstdcpp11_gcc_debug_64.hdf5-shared-False.txt ******************************************************************************** Configuration: [settings] arch=x86_64 build_type=Debug compiler=gcc compiler.libcxx=libstdc++11 compiler.version=5 os=Linux [options] hdf5:shared=False [build_requires] [env] hdf5/1.12.0: Forced build from source Installing package: hdf5/1.12.0 Requirements hdf5/1.12.0 from local cache - Cache zlib/1.2.11 from 'conan-center' - Cache Packages hdf5/1.12.0:419a7486e9ee432ebccdf35e464e6e8a3071cb25 - Build zlib/1.2.11:b1b85bfdc2206d81b3ed6a49e78498182bb98ef3 - Cache Installing (downloading, building) binaries... zlib/1.2.11: Already installed! hdf5/1.12.0: Copying sources to build folder hdf5/1.12.0: Building your package in /home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25 hdf5/1.12.0: Generator cmake created conanbuildinfo.cmake hdf5/1.12.0: Aggregating env generators [HOOK - conan-center.py] pre_build(): [FPIC MANAGEMENT (KB-H007)] OK. 'fPIC' option found and apparently well managed [HOOK - conan-center.py] pre_build(): [FPIC MANAGEMENT (KB-H007)] OK hdf5/1.12.0: Calling build() ----Running------ > cd '/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25/build_subfolder' && cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE="Debug" -DCONAN_IN_LOCAL_CACHE="ON" -DCONAN_COMPILER="gcc" -DCONAN_COMPILER_VERSION="5" -DCONAN_CXX_FLAGS="-m64" -DCONAN_SHARED_LINKER_FLAGS="-m64" -DCONAN_C_FLAGS="-m64" -DCONAN_LIBCXX="libstdc++11" -DBUILD_SHARED_LIBS="OFF" -DCMAKE_INSTALL_PREFIX="/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/package/419a7486e9ee432ebccdf35e464e6e8a3071cb25" -DCMAKE_INSTALL_BINDIR="bin" -DCMAKE_INSTALL_SBINDIR="bin" -DCMAKE_INSTALL_LIBEXECDIR="bin" -DCMAKE_INSTALL_LIBDIR="lib" -DCMAKE_INSTALL_INCLUDEDIR="include" -DCMAKE_INSTALL_OLDINCLUDEDIR="include" -DCMAKE_INSTALL_DATAROOTDIR="share" -DCONAN_CMAKE_POSITION_INDEPENDENT_CODE="ON" -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY="ON" -DCONAN_EXPORTED="1" -DHDF5_EXTERNALLY_CONFIGURED="True" -DHDF5_EXTERNAL_LIB_PREFIX="" -DHDF5_USE_FOLDERS="False" -DHDF5_NO_PACKAGES="True" -DALLOW_UNSUPPORTED="False" -DONLY_SHARED_LIBS="False" -DBUILD_STATIC_EXECS="False" -DHDF5_ENABLE_COVERAGE="False" -DHDF5_ENABLE_USING_MEMCHECKER="False" -DHDF5_MEMORY_ALLOC_SANITY_CHECK="False" -DHDF5_ENABLE_PREADWRITE="True" -DHDF5_ENABLE_DEPRECATED_SYMBOLS="True" -DHDF5_BUILD_GENERATORS="False" -DHDF5_ENABLE_TRACE="False" -DHDF5_ENABLE_INSTRUMENT="False" -DHDF5_ENABLE_PARALLEL="False" -DHDF5_ENABLE_Z_LIB_SUPPORT="True" -DHDF5_ENABLE_SZIP_SUPPORT="False" -DHDF5_ENABLE_SZIP_ENCODING="False" -DHDF5_PACKAGE_EXTLIBS="False" -DHDF5_ENABLE_THREADSAFE="False" -DHDF5_ENABLE_DEBUG_APIS="False" -DBUILD_TESTING="False" -DHDF5_INSTALL_INCLUDE_DIR="/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/package/419a7486e9ee432ebccdf35e464e6e8a3071cb25/include/hdf5" -DHDF5_BUILD_TOOLS="False" -DHDF5_BUILD_EXAMPLES="False" -DHDF5_BUILD_HL_LIB="True" -DHDF5_BUILD_FORTRAN="False" -DHDF5_BUILD_CPP_LIB="True" -DHDF5_BUILD_JAVA="False" -Wno-dev '/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25' ----------------- -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Conan: called by CMake conan helper -- Conan: called inside local cache -- Conan: Adjusting output directories -- Conan: Using cmake targets configuration -- Library z found /home/conan/w/BuildSingleReference/.conan/data/zlib/1.2.11/_/_/package/b1b85bfdc2206d81b3ed6a49e78498182bb98ef3/lib/libz.a -- Conan: Adjusting default RPATHs Conan policies -- Conan: Adjusting language standard -- Conan: Adjusting fPIC flag (ON) -- Conan: Compiler GCC>=5, checking major version 5 -- Conan: Checking correct version: 5 -- Conan: C++ stdlib: libstdc++11 -- SOVERSION: 200.0.0 -- SOVERSION_TOOLS: 200.0.0 -- SOVERSION_CXX: 200.0.0 -- SOVERSION_F: 200.0.0 -- SOVERSION_HL: 200.0.0 -- SOVERSION_HL_CXX: 200.0.0 -- SOVERSION_HL_F: 200.0.0 -- SOVERSION_JAVA: 200.0.0 -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Looking for include file sys/file.h -- Looking for include file sys/file.h - found -- Looking for include files sys/file.h, sys/ioctl.h -- Looking for include files sys/file.h, sys/ioctl.h - found -- Looking for 3 include files sys/file.h, ..., sys/resource.h -- Looking for 3 include files sys/file.h, ..., sys/resource.h - found -- Looking for 4 include files sys/file.h, ..., sys/socket.h -- Looking for 4 include files sys/file.h, ..., sys/socket.h - found -- Looking for 5 include files sys/file.h, ..., sys/stat.h -- Looking for 5 include files sys/file.h, ..., sys/stat.h - found -- Looking for 6 include files sys/file.h, ..., sys/time.h -- Looking for 6 include files sys/file.h, ..., sys/time.h - found -- Looking for 7 include files sys/file.h, ..., sys/types.h -- Looking for 7 include files sys/file.h, ..., sys/types.h - found -- Looking for 8 include files sys/file.h, ..., features.h -- Looking for 8 include files sys/file.h, ..., features.h - found -- Looking for 9 include files sys/file.h, ..., dirent.h -- Looking for 9 include files sys/file.h, ..., dirent.h - found -- Looking for 10 include files sys/file.h, ..., setjmp.h -- Looking for 10 include files sys/file.h, ..., setjmp.h - found -- Looking for 11 include files sys/file.h, ..., stddef.h -- Looking for 11 include files sys/file.h, ..., stddef.h - found -- Looking for 12 include files sys/file.h, ..., stdint.h -- Looking for 12 include files sys/file.h, ..., stdint.h - found -- Looking for 13 include files sys/file.h, ..., unistd.h -- Looking for 13 include files sys/file.h, ..., unistd.h - found -- Looking for 14 include files sys/file.h, ..., mach/mach_time.h -- Looking for 14 include files sys/file.h, ..., mach/mach_time.h - not found -- Looking for 14 include files sys/file.h, ..., io.h -- Looking for 14 include files sys/file.h, ..., io.h - not found -- Looking for 14 include files sys/file.h, ..., winsock2.h -- Looking for 14 include files sys/file.h, ..., winsock2.h - not found -- Looking for 14 include files sys/file.h, ..., sys/timeb.h -- Looking for 14 include files sys/file.h, ..., sys/timeb.h - found -- Looking for 15 include files sys/file.h, ..., globus/common.h -- Looking for 15 include files sys/file.h, ..., globus/common.h - not found -- Looking for 15 include files sys/file.h, ..., pdb.h -- Looking for 15 include files sys/file.h, ..., pdb.h - not found -- Looking for 15 include files sys/file.h, ..., pthread.h -- Looking for 15 include files sys/file.h, ..., pthread.h - found -- Looking for 16 include files sys/file.h, ..., srbclient.h -- Looking for 16 include files sys/file.h, ..., srbclient.h - not found -- Looking for 16 include files sys/file.h, ..., string.h -- Looking for 16 include files sys/file.h, ..., string.h - found -- Looking for 17 include files sys/file.h, ..., strings.h -- Looking for 17 include files sys/file.h, ..., strings.h - found -- Looking for 18 include files sys/file.h, ..., stdlib.h -- Looking for 18 include files sys/file.h, ..., stdlib.h - found -- Looking for 19 include files sys/file.h, ..., memory.h -- Looking for 19 include files sys/file.h, ..., memory.h - found -- Looking for 20 include files sys/file.h, ..., dlfcn.h -- Looking for 20 include files sys/file.h, ..., dlfcn.h - found -- Looking for 21 include files sys/file.h, ..., inttypes.h -- Looking for 21 include files sys/file.h, ..., inttypes.h - found -- Looking for 22 include files sys/file.h, ..., netinet/in.h -- Looking for 22 include files sys/file.h, ..., netinet/in.h - found -- Looking for 23 include files sys/file.h, ..., stdbool.h -- Looking for 23 include files sys/file.h, ..., stdbool.h - found -- Looking for include file quadmath.h -- Looking for include file quadmath.h - found -- Looking for ceil in m; -- Looking for ceil in m; - found -- Looking for dlopen in dl;m -- Looking for dlopen in dl;m - found -- Looking for WSAStartup in ws2_32;m;dl -- Looking for WSAStartup in ws2_32;m;dl - not found -- Looking for gethostbyname in wsock32;m;dl -- Looking for gethostbyname in wsock32;m;dl - not found -- Looking for gethostname in ucb;m;dl -- Looking for gethostname in ucb;m;dl - not found -- Performing Other Test STDC_HEADERS - Success -- Performing TEST_LFS_WORKS... yes -- Performing Other Test HAVE_OFF64_T - Success -- Looking for lseek64 -- Looking for lseek64 - found -- Looking for fseeko -- Looking for fseeko - found -- Performing Other Test HAVE_STAT64_STRUCT - Success -- Looking for stat64 -- Looking for stat64 - found -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of unsigned -- Check size of unsigned - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of __int64 -- Check size of __int64 - failed -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of long double -- Check size of long double - done -- Check size of int8_t -- Check size of int8_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of int_least8_t -- Check size of int_least8_t - done -- Check size of uint_least8_t -- Check size of uint_least8_t - done -- Check size of int_fast8_t -- Check size of int_fast8_t - done -- Check size of uint_fast8_t -- Check size of uint_fast8_t - done -- Check size of int16_t -- Check size of int16_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Check size of int_least16_t -- Check size of int_least16_t - done -- Check size of uint_least16_t -- Check size of uint_least16_t - done -- Check size of int_fast16_t -- Check size of int_fast16_t - done -- Check size of uint_fast16_t -- Check size of uint_fast16_t - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of int_least32_t -- Check size of int_least32_t - done -- Check size of uint_least32_t -- Check size of uint_least32_t - done -- Check size of int_fast32_t -- Check size of int_fast32_t - done -- Check size of uint_fast32_t -- Check size of uint_fast32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of int_least64_t -- Check size of int_least64_t - done -- Check size of uint_least64_t -- Check size of uint_least64_t - done -- Check size of int_fast64_t -- Check size of int_fast64_t - done -- Check size of uint_fast64_t -- Check size of uint_fast64_t - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - done -- Check size of ptrdiff_t -- Check size of ptrdiff_t - done -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - done -- Check size of time_t -- Check size of time_t - done -- Check size of _Bool -- Check size of _Bool - done -- Performing Other Test DEV_T_IS_SCALAR - Success -- Looking for CLOCK_MONOTONIC -- Looking for CLOCK_MONOTONIC - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Performing Other Test HAVE_TM_GMTOFF - Success -- Performing Other Test HAVE___TM_GMTOFF - Failed -- Performing Other Test HAVE_STRUCT_TIMEZONE - Success -- Performing Other Test GETTIMEOFDAY_GIVES_TZ - Success -- Performing Other Test TIME_WITH_SYS_TIME - Success -- Performing Other Test HAVE_TM_ZONE - Failed -- Performing Other Test HAVE_STRUCT_TM_TM_ZONE - Failed -- Performing Other Test HAVE_TIMEZONE - Success -- Performing Other Test HAVE_STAT_ST_BLOCKS - Success -- Looking for ioctl -- Looking for ioctl - found -- Performing Other Test HAVE_STRUCT_VIDEOCONFIG - Failed -- Performing Other Test HAVE_STRUCT_TEXT_INFO - Failed -- Looking for _getvideoconfig -- Looking for _getvideoconfig - not found -- Looking for gettextinfo -- Looking for gettextinfo - not found -- Looking for _scrsize -- Looking for _scrsize - not found -- Looking for GetConsoleScreenBufferInfo -- Looking for GetConsoleScreenBufferInfo - not found -- Looking for TIOCGWINSZ -- Looking for TIOCGWINSZ - found -- Looking for TIOCGETD -- Looking for TIOCGETD - found -- Looking for getpwuid -- Looking for getpwuid - found -- Looking for alarm -- Looking for alarm - found -- Looking for fcntl -- Looking for fcntl - found -- Looking for flock -- Looking for flock - found -- Looking for fork -- Looking for fork - found -- Looking for frexpf -- Looking for frexpf - found -- Looking for frexpl -- Looking for frexpl - found -- Looking for gethostname -- Looking for gethostname - found -- Looking for getrusage -- Looking for getrusage - found -- Looking for llround -- Looking for llround - not found -- Looking for llroundf -- Looking for llroundf - not found -- Looking for lround -- Looking for lround - not found -- Looking for lroundf -- Looking for lroundf - not found -- Looking for lstat -- Looking for lstat - found -- Looking for pread -- Looking for pread - found -- Looking for pwrite -- Looking for pwrite - found -- Looking for rand_r -- Looking for rand_r - found -- Looking for random -- Looking for random - found -- Looking for round -- Looking for round - not found -- Looking for roundf -- Looking for roundf - not found -- Looking for setsysinfo -- Looking for setsysinfo - not found -- Looking for signal -- Looking for signal - found -- Looking for longjmp -- Looking for longjmp - found -- Looking for setjmp -- Looking for setjmp - found -- Looking for siglongjmp -- Looking for siglongjmp - found -- Looking for sigsetjmp -- Looking for sigsetjmp - not found -- Looking for sigprocmask -- Looking for sigprocmask - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for srandom -- Looking for srandom - found -- Looking for strdup -- Looking for strdup - found -- Looking for strtoll -- Looking for strtoll - found -- Looking for strtoull -- Looking for strtoull - found -- Looking for symlink -- Looking for symlink - found -- Looking for system -- Looking for system - found -- Looking for tmpfile -- Looking for tmpfile - found -- Looking for asprintf -- Looking for asprintf - found -- Looking for vasprintf -- Looking for vasprintf - found -- Looking for waitpid -- Looking for waitpid - found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Performing Other Test VSNPRINTF_WORKS - Success -- Looking for sigsetjmp -- Looking for sigsetjmp - found -- Performing Other Test HAVE_ATTRIBUTE - Success -- Performing Other Test HAVE_C99_FUNC - Success -- Performing Other Test HAVE_FUNCTION - Success -- Performing Other Test HAVE_C99_DESIGNATED_INITIALIZER - Success -- Performing Other Test SYSTEM_SCOPE_THREADS - Success -- Performing Other Test HAVE_SOCKLEN_T - Success -- Performing Other Test HAVE_INLINE - Success -- Performing Other Test HAVE___INLINE__ - Success -- Performing Other Test HAVE___INLINE - Success -- Checking for appropriate format for 64 bit long: -- Checking for appropriate format for 64 bit long: found "l" -- Looking for difftime -- Looking for difftime - found -- Looking for clock_gettime -- Looking for clock_gettime - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for clock_gettime in posix4 -- Looking for clock_gettime in posix4 - not found -- Check size of __float128 -- Check size of __float128 - done -- Check size of _Quad -- Check size of _Quad - failed -- Checking IF your system converts long double to (unsigned) long values with special algorithm... no hdf5/1.12.0: Terminated hdf5/1.12.0: WARN: Build folder is dirty, removing it: /home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25 hdf5/1.12.0: ERROR: Package '419a7486e9ee432ebccdf35e464e6e8a3071cb25' build failed hdf5/1.12.0: WARN: Build folder /home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25 ERROR: hdf5/1.12.0: Error in build() method, line 105 cmake = self._configure_cmake() while calling '_configure_cmake', line 157 self._cmake.configure(build_folder=self._build_subfolder) ConanException: Error 143 while executing cd '/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25/build_subfolder' && cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE="Debug" -DCONAN_IN_LOCAL_CACHE="ON" -DCONAN_COMPILER="gcc" -DCONAN_COMPILER_VERSION="5" -DCONAN_CXX_FLAGS="-m64" -DCONAN_SHARED_LINKER_FLAGS="-m64" -DCONAN_C_FLAGS="-m64" -DCONAN_LIBCXX="libstdc++11" -DBUILD_SHARED_LIBS="OFF" -DCMAKE_INSTALL_PREFIX="/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/package/419a7486e9ee432ebccdf35e464e6e8a3071cb25" -DCMAKE_INSTALL_BINDIR="bin" -DCMAKE_INSTALL_SBINDIR="bin" -DCMAKE_INSTALL_LIBEXECDIR="bin" -DCMAKE_INSTALL_LIBDIR="lib" -DCMAKE_INSTALL_INCLUDEDIR="include" -DCMAKE_INSTALL_OLDINCLUDEDIR="include" -DCMAKE_INSTALL_DATAROOTDIR="share" -DCONAN_CMAKE_POSITION_INDEPENDENT_CODE="ON" -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY="ON" -DCONAN_EXPORTED="1" -DHDF5_EXTERNALLY_CONFIGURED="True" -DHDF5_EXTERNAL_LIB_PREFIX="" -DHDF5_USE_FOLDERS="False" -DHDF5_NO_PACKAGES="True" -DALLOW_UNSUPPORTED="False" -DONLY_SHARED_LIBS="False" -DBUILD_STATIC_EXECS="False" -DHDF5_ENABLE_COVERAGE="False" -DHDF5_ENABLE_USING_MEMCHECKER="False" -DHDF5_MEMORY_ALLOC_SANITY_CHECK="False" -DHDF5_ENABLE_PREADWRITE="True" -DHDF5_ENABLE_DEPRECATED_SYMBOLS="True" -DHDF5_BUILD_GENERATORS="False" -DHDF5_ENABLE_TRACE="False" -DHDF5_ENABLE_INSTRUMENT="False" -DHDF5_ENABLE_PARALLEL="False" -DHDF5_ENABLE_Z_LIB_SUPPORT="True" -DHDF5_ENABLE_SZIP_SUPPORT="False" -DHDF5_ENABLE_SZIP_ENCODING="False" -DHDF5_PACKAGE_EXTLIBS="False" -DHDF5_ENABLE_THREADSAFE="False" -DHDF5_ENABLE_DEBUG_APIS="False" -DBUILD_TESTING="False" -DHDF5_INSTALL_INCLUDE_DIR="/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/package/419a7486e9ee432ebccdf35e464e6e8a3071cb25/include/hdf5" -DHDF5_BUILD_TOOLS="False" -DHDF5_BUILD_EXAMPLES="False" -DHDF5_BUILD_HL_LIB="True" -DHDF5_BUILD_FORTRAN="False" -DHDF5_BUILD_CPP_LIB="True" -DHDF5_BUILD_JAVA="False" -Wno-dev '/home/conan/w/BuildSingleReference/.conan/data/hdf5/1.12.0/_/_/build/419a7486e9ee432ebccdf35e464e6e8a3071cb25' Terminated